Down the Rabbit Hole

The problem: data drudgery.  Our solution: business intelligence tools.  Two business intelligence tools are available for use at the Napa-Solano-Yolo-Marin Public Health Laboratory (NSYM PHL): Power BI and R. I described how the laboratory staff use these tools during my presentation to LabAspire Fellows and their mentors. I'm sharing part of it here.  Context The NSYM PHL processes over 6,000 specimens annually, with more than 75% being environmental specimens (i.e., water samples and ticks). The rest are clinical specimens. Once these specimens are in the laboratory, they undergo three phases of testing: Pre-analytical phase Information about the specimen is derived from the requisition form that comes with it: patient information (i.e., unique identifiers, travel history), submitter (oftentimes the medical facility) information, and sample information (i.e., sample source and type, collection date and time, type of test requested). The information is then entered ...

Listening to Steven Bartlett's  Diary of a CEO  episodes on  inflammation  and  herbal medicine  came around the same time I was exploring how to improve my vitamin levels. I used to take prenatal multivitamins and then individual vitamin and mineral supplements. I even tried green juices. However, the habit of drinking vitamins and minerals in tablet or capsule form doesn't stick; I didn't like the taste of green juices. As I continued researching, I encountered IM8, a product that claims to contain 92 nutrient-rich ingredients, including vitamins, minerals, superfoods, antioxidants, prebiotics, probiotics, and postbiotics.  It sounded too good to be true; however, it contains  spore-forming probiotics,  Bacillus subtilis  and  B. coagulans .  This is consistent with what Dr Jamnadas said about what he's personally taking to improve his gut microbiome. Moreover, it promises berry flavours with chocolate undertones; not my favo...

I regularly listen to Steven Bartlett's Diary of a CEO (DOAC) podcast during my commute to work (it's currently in my driving playlist, along with finance podcasts) and during my solo lunch-time one-mile walks because his discussions with guests are compelling and informative. One of the episodes I listened to featured Dr Pradip Jamnadas , the founder of Aristotle Education LLC. I found this episode interesting because it followed soon after the discussion with Simon Mills on herbal medicine . Simon Mills discussed inflammation and its relationship to the body's immune response. To recap, inflammation occurs when blood vessels become more permeable, allowing white blood cells and other immune system components to leave the blood vessels, enter the injured area of the body, and attack the pathogens causing infections. NSAIDs are not ideal medications because they tend to dampen one's immune response. His treatments of choice are concoctions of different plant materials,...

I have subscribed to Steven Bartlett's Diary of a CEO (DOAC) after I listened to the episode about feet and barefoot running. I appreciate his inclination to invite scientists to discuss their expertise... these guests are conversational, not overly technical or jargon-filled. For instance, the episode featuring Simon Mills (my favourite so far) was all about phytotherapy. Antibiotic resistance limits the medicines available for treating illnesses. Enter phytotherapy. I've witnessed the alarming effects of antibiotic resistance firsthand while at work. Patients with bacterial infections must be screened for the antibiotic susceptibilities of the causative pathogens so that doctors can determine the most effective treatment.  In the lab, isolates identified as  Mycobacterium tuberculosis  complex  from specimens submitted by the same patient are sent to the California Department of Public Health  every 90 days (based on collection date). This is crucial in a pat...

Donan has started Kindergarten. In the first week of the academic year, the school he's enrolled in launched a fundraising campaign in support of the Parent-Teacher Organisation's activities for the school year. It's called "Raise Craze". In this fundraising campaign, each participant performs acts of kindness in honour of the generosity of the donor. I have not experienced this as a child because we normally exchanged donations with raffle tickets or goods (just like what the Girl Scouts do with their cookies). In Donan's case, we pledged to donate his gently used clothes and shoes to a local charity (we had chosen  The Society of St. Vincent de Paul  while planning how to participate).  View this post on Instagram Val and I sent out messages to friends and family to help raise funds. And everyone we asked generously pitched in. In total, Donan's contribution to the organisation was $455!  I thank everyone who showed up for Donan. It...

 You don't quit when it's hard. You quit when it's over. I didn't complete the half-marathon distance in my first Orangetheory Marathon Month attempt , logging only 10.02 miles on the treadmill. I told myself I would refrain from joining these challenges because being so close and yet so far was such a let-down.  The following month, however, I decided to join the DriTri sprint challenge because I couldn't shake off the feeling that I could actually finish this. If the half-marathon is 13.1 miles spread over a month, the DriTri sprint is composed of a 1,000-metre row, 130 reps of bodyweight exercises, and a 1.55-mile treadmill run to be finished within one hour. Crazy for a non-finisher, right? Nevertheless, I took on this challenge. While on the rower, I thought that reaching the distance was easy enough because I started at a good pace. Then fatigue kicked in, about halfway through the rowing portion. I struggled through the rest of the distance as I couldn't...