Skip to main content

When science meets art

Representatives of Carl Zeiss, a well-known maker of optical instruments (case in point: the lens of the Nokia 5800 Xpressmusic's camera), were in IRRI today to demonstrate a new model of the confocal laser scanning microscope called LSM 710. I'm not sure how often I'd be able to use such a device, being involved in grain quality and cereal chemistry, but I'm sure researchers in the plant genetics and cell biology areas will find a lot of uses for this machine).

In the typical microscopes used in school, visible light is reflected onto a specimen (on a slide) by a mirror. Stains could be added to the sample for easier detection on a slide. The operation is highly manual (the user moves the slide, adjusts the mirror, turns knobs, and changes objectives). Because of its weight, the light microscope is pretty easy to transfer. The confocal laser scanning microscope, on the other hand, uses a laser beam to illuminate the sample, which is also on a glass slide. Fluorescent dyes are used to stain the specimens, which the laser beam excite. The result is a vividly coloured image such as the picture below.

These colours may not be true to what the eye sees under the lens (using visible light), but there's no need to look at the eyepiece once the specimen has been found on the slide. The image is transmitted to a computer, where all the editing can be done. With all the options available, the image editing software rivals what is usually applied to digital pictures from the usual point-and-shoot and DSLR. The laser generator, the microscope, and the computer add to the size and weight of the machine makes transportation of the system more complicated than the light microscope. 

With advances in microscopy, the smallest of objects can be seen and appreciated. There's even another technique called atomic force microscopy which can show how polymers are arranged inside a starch granule! Victor J. Morris lectured on this during the Starch 2008 conference in Nottingham, UK, and presented pictures that could help interpret the behaviour of starch in certain conditions. But that's a different story.

In college, I only read about this technique. But now, I have seen the instrument... it has become something tangible! And it's another form of photography too!

Comments

Popular posts from this blog

10 things I learned while driving on Marcos Highway to Baguio City

I went on a day trip to the City of Pines, which was around a 700-km drive from my house. I drove  going up there and then from the city to Victoria, Tarlac. After that, my dad took over the driving duties. It was day trip with Tita Ising and Tito Sibing with us. Anyway, this trip was my first time to go to Baguio City with me behind the wheel. As everyone who drives up knows, there are three main routes to Baguio from the lowlands: Kennon Road, which ascends from Rosario, La Union. It was out of my options because it's too dangerous to use that road in the rainy season. The second route is via Naguilian Road, which makes my trip a lot longer because the beginning of the ascent is in Bauang, La Union (further north). The last route, and the one I took, was the Marcos Highway, now known as the Aspiras-Palispis Highway. This 47-km road starts from Agoo, La Union and is touted as the safest route among the three.  As I drove up and then down (on the same day; we were in Bagu

How MALDI-TOF-MS makes mycobacterium diagnosis faster and more accurate

The laboratory I work in has plenty of instruments that help us characterise and identify microorganisms causing diseases in patients. One of my current projects is to validate an instrument called "matrix-assisted laser desorption ionization-time of flight mass spectrometer" (MALDI-TOF-MS) in identifying members of the Mycobacterium  species. Many of these organisms are opportunistic, meaning they only cause illnesses in people whose immune systems are not strong enough to fight infections. Mycobacterium leprae  is known for causing leprosy, but we cannot grow this bacterium in culture media, so we cannot isolate it. Mycobacterium tuberculosis  complex, on the other hand, is a group of several species of Mycobacterium  that causes tuberculosis. Tuberculosis is a disease that killed 1.6 million people in 2021 alone. It is a leading cause of death globally, second only to COVID-19 since the pandemic began. Identifying the Mycobacterium species that has infected a patient is

a crash course on traditional Filipino houses

On Dr Jose Rizal's birthday this year, I was back in historic Manila with Ate Bing, Ate Mary , and Manuel . But instead of visiting him, we opted to soak up on Philippine culture. Our first stop: the Cultural Center of the Philippines ' (CCP) Museo ng Kalinangang Pilipino .  Aside from the musical instruments, I noticed the dioramas about Filipino homes. Filipinos living by the sea (the 'sea gypsies', Sama Dilaut or Badjao ) have boathouses; those who live in the mountains, like the Bagobos , have developed interconnected houses in the trees; Filipinos who live along the path of the strongest typhoon winds, such as the Ivatans , have developed houses of thick limestone walls; and people who live in calmer conditions used bamboo and nipa to construct their houses, like the lowlanders and the Agtas . Sama Dilaut 'lepa' and houses on stilts (in the background) Ivatan limestone house nipa hut Ifugao 'fale' Maranao '